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Commits on Mar 24, 2016

• [maven-release-plugin] prepare for next development iteration

  abradle

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha2

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Commits on Mar 14, 2016

• Updates to the Biojava code to include imporved handling of Entity information.

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Commits on Mar 10, 2016

• [maven-release-plugin] prepare for next development iteration

  andreasprlic

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• [maven-release-plugin] prepare release biojava-4.2.0

  andreasprlic

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• Light cleanup:

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  sbliven

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• Running spacestotabs on recent changes

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  sbliven

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• Run addlicense

  sbliven

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Commits on Mar 9, 2016

• Merge branch 'master' into removeLoadChemCompInfo

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  josemduarte

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• Removing unnecessary casts

  sbliven

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• Docs

  josemduarte

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• Fixing issues with bonds in 3th3 and better logging

  josemduarte

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• More whitespace fixes

  sbliven

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• Automatically adding missing @Override

  sbliven

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• Converting initial spaces to tabs.

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  sbliven

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• Remove trailing whitespace globally from .java files

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  sbliven

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• Running addlicense.sh

  sbliven

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• Better docs and an empty test

  josemduarte

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Commits on Mar 8, 2016

• Fixing a few bugs that arose after loadChemCompInfo removal, #426

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  josemduarte

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• Tests pass now, except for TestLongPdbVsMmcif

  josemduarte

  committed
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• Removing loadChemCompInfo, some tests don't pass yet

  josemduarte

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• Converting test to junit 4

  josemduarte

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Commits on Mar 4, 2016

• Implementing #408

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  josemduarte

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• Refactoring of Structure ssbonds interface, as described in #341

  josemduarte

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Commits on Mar 2, 2016

• Added unit test

  abradle

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Commits on Feb 24, 2016

• Fixing issues arising after making DownloadChemCompProvider the default

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  josemduarte

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Commits on Feb 19, 2016

• Adding TER records to pdb file export.

  

  Matt Larson

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Commits on Feb 9, 2016

• ECOD improvements (Fix #384)

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  sbliven

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Commits on Feb 3, 2016

• Merge branch 'master' into cesymm

  lafita

  committed
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• Fixing a few issues related to #343

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  josemduarte

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Commits on Feb 2, 2016

• Fixing issue related to PR #394, see also issue #305.

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Commits on Feb 1, 2016

• Merge branch 'master' into cesymm

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  lafita

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• toString method in CeSymmResult class

  lafita

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Commits on Jan 30, 2016

• Fixing NPE in test

  josemduarte

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Commits on Jan 19, 2016

• Add substantially new unified class for identify structures: StructureIdentifier

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  sbliven

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