medical-image-computing
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To help with community discussion and support, it would be good to point users towards preferred discussion channels. Note that this would be in support of more formal documentation (see #16).
Typically, bugs and feature requests would be going on the GitHub issue tracker but other means of supporting the discussion would be helpful.
For example, do we point users towards Stack Overflow for
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https://github.com/bioinformatics-ua/dicoogle/blob/9d612ad883c4310e50a14fd382a0af56a2e8f2ed/dicoogle/src/main/java/pt/ua/dicoogle/server/SearchDicomResult.java#L310
It is necessary to change the encoding without recompiling and determine it automatically based on the dicom tag.
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At the moment, standard codes used require manual typing of the code tuple, such as here. This is error-prone and long. Instead, we should use the #define
d constants, as done in dcmsr
: https://github.com/commontk/DCMTK/blob/patched-DCMTK-3.6.3_20180205/dcmsr/include/dcmtk/dcmsr/codes/dcm.h#L51.
It would be also i
CaPTk feature extraction documentation is weak in my opinion. It is so hard to understand that feature have combined, individual, .....
Someone should sit and clarify the variables in another file or webpage, rather than briefly describing them in the parameter file that no-one can understand them. Please add some images to clarify what each of the parameters is supposed to do (at least major
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Sonia, please check and test the following improved things in SlicerDMRI before you come to Slicer day on Aug 30, 2016. Please share your per-module and overall feedback in a google document.
Improvements to check:
-- Overall module category reorganization for Diffusion.
-- Module changes: names, categories, GUI labels and descriptions (tooltips).
-- All module help pages.
Specific modules to be
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cornerstone has native support for layers and transparency and it would be useful to output segmentations and heatmaps and show multi-modal images like PET-CT
relevant JS is https://github.com/cornerstonejs/cornerstone/blob/803dd7335e16de3cc398a3d42eda2552dd47cb1b/example/layers/index.html#L95-L152
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Create a step by step end-user tutorial for DWModeling:
- data load from DICOM
- data visualization
- modeling
- model visualization (including log view)
- summary statistics
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I am not clear about what the iteration means. Could you explain more about it? Also, how is it related to epoch?
Thanks.