COLLECTED BY

Organization: Archive Team

Formed in 2009, the Archive Team (not to be confused with the archive.org Archive-It Team) is a rogue archivist collective dedicated to saving copies of rapidly dying or deleted websites for the sake of history and digital heritage. The group is 100% composed of volunteers and interested parties, and has expanded into a large amount of related projects for saving online and digital history.

History is littered with hundreds of conflicts over the future of a community, group, location or business that were "resolved" when one of the parties stepped ahead and destroyed what was there. With the original point of contention destroyed, the debates would fall to the wayside. Archive Team believes that by duplicated condemned data, the conversation and debate can continue, as well as the richness and insight gained by keeping the materials. Our projects have ranged in size from a single volunteer downloading the data to a small-but-critical site, to over 100 volunteers stepping forward to acquire terabytes of user-created data to save for future generations.

The main site for Archive Team is at archiveteam.org and contains up to the date information on various projects, manifestos, plans and walkthroughs.

This collection contains the output of many Archive Team projects, both ongoing and completed. Thanks to the generous providing of disk space by the Internet Archive, multi-terabyte datasets can be made available, as well as in use by the Wayback Machine, providing a path back to lost websites and work.

Our collection has grown to the point of having sub-collections for the type of data we acquire. If you are seeking to browse the contents of these collections, the Wayback Machine is the best first stop. Otherwise, you are free to dig into the stacks to see what you may find.

The Archive Team Panic Downloads are full pulldowns of currently extant websites, meant to serve as emergency backups for needed sites that are in danger of closing, or which will be missed dearly if suddenly lost due to hard drive crashes or server failures.

Collection: Archive Team: The Github Hitrub

This collection is a set of Github repository archives from two major sets: A panic grab upon the acquisition by Microsoft, and a larger, ongoing set of Pretty Much Everything.

TIMESTAMPS

The Wayback Machine - https://web.archive.org/web/20180617180654/https://github.com/sbl-sdsc/mmtf-workshop-2018

Structural Bioinformatics Training Workshop & Hackathon 2018

pyspark binder protein-data-bank jupyter-notebook jupyter machine-learning big-data protein-protein-interaction protein-ligand-interactions 3d-visualization apache-spark workshop-materials hackathon

Jupyter Notebook 99.9%
Other 0.1%

Jupyter Notebook Other

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README.md

Structural Bioinformatics Training Workshop & Hackathon 2018

Application of Big Data Technology and 3D Visualization, San Diego Supercomputer Center, UC San Diego, May 7-9, 2018

To try out our jupyter notebook demos without any installation, please click this binder button ->

It can take a few minutes for Binder to setup the environment.

Installation

Please follow the installation guide on mmtfPyspark's GitHub to install the python package.

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Clone this repository by running the following command on your terminal:

git clone https://github.com/sbl-sdsc/mmtf-workshop-2018.git

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May	JUN	Sep
	17
2017	2018	2020

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	0-introduction
	1-3D-visualization
	2-intro-pyspark
	3-mmtf-pyspark
	4-mmtf-pyspark-advanced
	5-mmtf-datastructure
	6-machine-learning
	7-plans
	8-hackathon
	resources
	.gitignore
	LICENSE
	MMTF-Workshop-2018.pdf
	README.md
	apt.txt
	environment.yml
	postBuild

sbl-sdsc/mmtf-workshop-2018

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README.md

Structural Bioinformatics Training Workshop & Hackathon 2018

Installation

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