semaphores
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Problem
Individual notes may have footnotes. Those footnotes are numbered in accordance to the file. When the individual topic notes are merged, they keep (as supposed) the footnote number they had.
This causes
- pandoc outputs a warning on duplicated footnotes
- the footnotes in the published are incorrect
![image](https://user-images.githubusercontent.com/10232078/34893495-5bee41c2-
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