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#
bioinformatics-analysis
Here are
196 public repositories
matching this topic...
Bioinformatics containers
Updated
Mar 29, 2021
Dockerfile
GCP Essentials for Bioinformatics Researchers
Updated
Jul 21, 2021
Jupyter Notebook
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
A modern genomics framework for julia
Updated
Jul 6, 2020
Julia
BioContainers specifications
A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform
[DEPRECATED, see
https://immunarch.com/ ] tcR: an R package for immune receptor repertoire advanced data analysis.
An unsupervised transfer learning approach for rare disease transcriptomics
Updated
Jan 27, 2020
HTML
A collection of Web Service Clients to consume EBI's tools via REST and SOAP APIs.
GREIN : GEO RNA-seq Experiments Interactive Navigator
Updated
May 28, 2019
HTML
High-throughput gene to knowledge mapping through massive integration of public sequencing data.
Updated
Feb 26, 2019
Jupyter Notebook
Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
Updated
Jun 4, 2021
Python
Plant Disease Identification Using Convulutional Neural Network
Updated
Sep 3, 2020
Python
Phigaro is a scalable command-line tool for predicting phages and prophages
Updated
Mar 10, 2021
HTML
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
Updated
Jul 24, 2021
Python
BigWig manpulation tools using libBigWig and htslib
An easy-to-use way for running Galaxy workflows.
Updated
Nov 19, 2019
JavaScript
This is the main repository for the HackBio'2020 Virtual Internship Experience ❤️
Updated
Aug 27, 2020
Shell
Colocalization analysis of genetic association signals
programs and scripts, mainly python, for analyses related to nucleic or protein sequences
Updated
Jul 21, 2021
Python
NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization
Updated
Apr 19, 2020
HTML
Repositório do grupo de estudo de Bioinformática da rede de comunidades das PyLadies Brasil.
Updated
Jul 1, 2021
Jupyter Notebook
A suite of tools to explore protein structures with Protein Blocks 🐍
Updated
Jan 27, 2021
Python
Manuscript describing ChronQC is now available online in Bioinformatics
Updated
Jun 25, 2019
HTML
Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
Updated
May 12, 2021
TypeScript
detecting Red Blood Cell with yolov2
Updated
Sep 14, 2018
Jupyter Notebook
Scripts and procedures for detecting positively selected genes and codons in primates
Updated
Nov 14, 2020
Perl
Detailed bioinformatics scripts and methods used in the NAM genome paper.
PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a smart query system which fits the computing resources to optimize the query speed.
Updated
Jun 2, 2021
Jupyter Notebook
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Alex,
Is there any proposal to also include the depth of coverage statistics in the summary output?
thanks!!