Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

A language and runtime for distributed, incremental data processing in the cloud

Assertive programming for R analysis pipelines

Automatic detection of defected solar panel modules

An alternative to MCMC for rapid analysis of models

Modules for processing extracellular electrophysiology data from Neuropixels probes

Enables data scientists to compose pipelines of analysis which consist of data manipulation, exploratory analysis & reporting, as well as modeling steps. Data scientists can use tools of their choice through an R interface, and compose interoperable pipelines between R, Spark, and Python.

A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

Environmental DNA metabarcoding analysis

vSNP -- validate SNPs

The MaNGA Data Analysis Pipeline

Automated and friendly RNA-seq analysis (deprecated)

PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.

This tool parses log data and allows to define analysis pipelines for anoamly detection. It was designed to run the analysis with limited resources and lowest possible permissions to make it suitable for production server use.

What people are tweeting about now, in your desired location? Live Streaming of Twitter Data to Spark and Tweet Analysis application on various trends Eg: Trending HashTags, Trending Mentions etc. Location based features supported.

KREWS Scientific Data Pipeline Framework

code used in van Raaphorst, Kjos & Veening (2017), Chromosome segregation drives division site selection in Streptococcus pneumoniae, PNAS

Lena is an architectural framework for data analysis

AcetoScan - Automated pipeline for the unsupervised analysis of FTHFS amplicon sequencing

snake - a malware storage zoo

Repository home of the Memo Lab's Psychophysiology Pipeline

Collection of Python scripts for various eye-tracking analyses for our fMRI studies