An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

QCTools (Quality Control Tools for Video Preservation) is a free and open source software tool that helps users analyze and understand their digitized video files through use of audiovisual analytics and filtering. QCTools is funded by the National Endowment for the Humanities and the Knight Foundation, and is developed by the Bay Area Video Coalition.

Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

Allows old code to use new standards

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

A Not So Very Intelligent Fuzzer: An advanced fuzzing framework designed to find vulnerabilities in C/C++ code.

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

Codebook from my GWAS cookbook

BAM Statistics, Feature Counting and Annotation

fork of mutant with inline disable comments and a few different mutations.

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

A Framework for Dimensionality Reduction in R

A toolkit for QC and visualization of ATAC-seq results.

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

ggQC

Static Analyzer for Java Code with Machine Learning in Mind

🚦 Run Picard on BAM files and collate 90 metrics into one file.

Adapter for NUnit 3 (generate HTML report for NUnit 3)

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

Nanopore data analysis in R

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant

Real-time monitoring of Firefox release health

CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

libmpv based application for quality control of videos

Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer

This package is no longer under active development. We recommend using Lighthouse CI. CLI tool for running Google’s Lighthouse checks

Automating run chart analysis for faceted displays of data across multiple metrics or locations

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

Ultra Fast NGS Data QC Tool

MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.